Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTEQREKLLEIHNLKQYFNKGTASEVRAVDDISFDIYKGETLGLVGESGCGKSTTGRTIIRLYDATGGEVIYNGKDVHARKSRKEMLEFRRKMQMIFQDPY----------ASLNPRMKVKDIIAEGIRIHGLAKTPEETNKQVYDLLETVGLSKEHAGRYPHEFSGGQRQRIGIARALAVQPEFIIADEPISALDVSIQAQVVNLLRQLQKEKNLTYLFIAHDLSMVKYISDRIGVMYFGKLVELAPANDLYHAPLHPYTESLLSAIPLPDPNYERTRVRKTYDPTSHNYKDGDEIKMREIAPGHFVYCSEEEEVMYKEKHAKLTAEAAAK
2PMK Chain:A ((21-235))----------------------------LDNINLSIKQGEVIGIVGRSGSGKSTLTKLIQRFYIPENGQVLIDGHDL----ALADPNWLRRQVGVVLQDNVLLNRSIIDNISLANPGMSVEKVIYAA-KLAGAHDFISEL-REGYNTI----VGEQGAG-----LSGGQRQRIAIARALVNNPKILIFDEATSALDYESEHVIMRNMHKICKGR--TVIIIAHRLSTVKN-ADRIIVMEKGKIVEQGKHKELLSEPESLYS-----------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2PMK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -96809 for 1500 contacts (-64.5/contact) +
2D Compatibility (PS) -21161 + (NN) -1050 + (LL) 8204
1D Compatibility (HY) -14400 + (ID) 3850
Total energy: -129066.0 ( -86.04 by residue)
QMean score : 0.421

(partial model without unconserved sides chains):
PDB file : Tito_2PMK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2PMK-query.scw
PDB file : Tito_Scwrl_2PMK.pdb: