Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSNTKFPDGFMWGGATAANQFEGGYNLGGKGLACADLFTGGTHTEPRRITAQLEESTFYPSHEAVDFYHHYKEDIKLMAEAGFKVFRMSINWTRIFPTGKEAEPNEEGLQFYEDVFNELKKHQIEPLVTIAHFDIPLALTNEVNGWASRDLIDYYLHFCEVIFKRYKHLVKHWLTFNEINTATMEIGNYLSLGIRHAEGDFLHQKDDPKVRYQALHHQFVASAKAVKLGHSINPDFMIGCMIAYMPRYPRTCEPSDVLLAKQTEAMHSH--FCGDVHVKGYYPFYAKTFFKDNGIELEFDPE---DEQILREGTVDFYTFSYYLTLCASNDPAYKNSGKSVIGGAENPYLKTNDWGMQTDPVGLRIALNDLYTRYNIP-LMVVENGLGAFDKLEDDGTINDPYRIDYFKEHILQMHKAIQDGVDLIGFTIWGCIDLVSASTGEMAKRYGIIYVDKYDDGTGDYSRKK---KASYYWYKDVISSNGEIGLEE |
1OIN Chain:B ((27-465)) | ----KFPEGFLWGVATASYQIEGSPLADGAGMSIWHTFSHTPGNVKNGDTGDV----------ACDHYNRWKEDIEIIEKLGVKAYRFSISWPRILPEGT-GRVNQKGLDFYNRIIDTLLEKGITPFVTIYHWDLPFALQLK-GGWANREIADWFAEYSRVLFENFGDRVKNWITLNEPWVVAI-VGHLYGV---HAPG-----MRDIYVAFRAVHNLLRAHARAVKVFRETV-DGKIGIVFNNGYFEPASEKEEDIRAVRFMHQFNNYPLFLNPIY-RGDYPELVLEFAR------EYLPENYKDDMSEIQEKIDFVGLNYYSGHLVKFDP----DAPAKVSFVERDLPKTAM-GWEIVPEGIYWILKKVKEEYNPPEVYITENGAAFDDVVSEDGRVHDQNRIDYLKAHIGQAWKAIQEGVPLKGYFVWSLLDNFEWAEG-YSKRFGIVYV--------DYSTQKRIVKDSGYWYSNVVKNNG------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OIN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -256841 for 3787 contacts (-67.8/contact) +
2D Compatibility (PS) -45052 + (NN) -14333 + (LL) 2360
1D Compatibility (HY) -30400 + (ID) 7350
Total energy: -351616.0 ( -92.85 by residue)
QMean score : 0.524
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