Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MSVLEIKNLHVSIE-DKEILKGLNLTLKTGEIAAIMGPNGTGKSTLSAAIMGNPNYEVTAGEILFDGEDILELEVDERARLGLFLAMQYPSEVPGITNAEFIRAAMNAGKADDDKISIRQFITKLDEKMELLGMKEEMAERYLNEGFSGGEKKRNEILQLLMLEPKFALLDEIDSGLDIDALKVVSKGVNEMRGE-GFGAMIITHYQRLLNYITPDKVHVMMDGKVVLSGGPELAVRLEKEGYAQIAEELGLEYKEEV----------------------------------------------------------------------------------------------------- |
| 1Z47 Chain:A ((11-355)) | GSMTIEFVGVEKIYPGGARSVRGVSFQIREGEMVGLLGPSGSGKTTILRLIAGLE--RPTKGDVWIGGKRVTDLPPQKR---NVGLVFQNYALFQHMTVYDNVSFGLRE-----KRVPKDEMDARVRELLRFMRLESYANRF--PHELSGGQQQRVALARALAPRPQVLLFDEPFAAIDTQIRRELRTFVRQVHDEMGVTSVFVTHDQEEALEV-ADRVLVLHEGNVEQFGTPEEVYE--KPGTLFVASFIGESNVWTRAVQNGRIEVAGAALPVDPAVSEGSEVAVVVRPKDVELQPASEREAHAQVVRSAFKGSYSACWIRTKDGEVWEVHVPSADRHRWSPGAWVHMNVTRWFIFPR |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1Z47.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -87289 for 1956 contacts (-44.6/contact) +
2D Compatibility (PS) -26042 + (NN) -5684 + (LL) 916
1D Compatibility (HY) -8000 + (ID) 2450
Total energy: -128549.0 ( -65.72 by residue)
QMean score : 0.522
|
|
|