Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKERVDVLAYKQGLFDTREQAKRGVMAGMVINVINGERYDKPGEKVADDTELKLKGEKL--------KYVSRGGLKLEKALQVFE----ISVADKLTIDIGASTGGFTDVMLQSGARLV-------------YAVDVGTNQLVWKLRQDHRVRSMEQYNFRYAQKEDFKEGLPEFASIDVSFISLNLILPALK---EILVDGGQVVALIKPQFEAG--REQIGKNGIVKDKLVHEKVLTTVTNFTKDYGYTVKHLDFSPIQGGHGNIEFLMHLQKCQDPQNLVLDQIQDVIEKAHKEFKKNEEE |
| 4IWX Chain:A ((19-312)) | -SHMKIAILSRDGTLYSCKRLREAAIQRGHLVEILDPLSCYMNINP--AASSIHYKGRKLPHFDAVIPRIGTAITFYGTAALRQFEMLGSYPLNESVAIARARDKLRSMQLLARQGIDLPVTGIAHSPDDTSDLIDMVGGAPLVVKLVEGTQGIGVVLAE----TRQAAESVIDAFRGLNAHILVQEYIKEAQGCDIRCLVVGDEVVAAIERRAKEGDFRSNLHRGGAASVASITPQEREIAIKAARTMALDVAGVDILRANRG----PLVMEVNASPGLEGIEKTTGIDIAGKMIRWIERHATT |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IWX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -37571 for 1970 contacts (-19.1/contact) +
2D Compatibility (PS) -27925 + (NN) 534 + (LL) 1008
1D Compatibility (HY) -10400 + (ID) 1950
Total energy: -76304.0 ( -38.73 by residue)
QMean score : 0.270
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