Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKQSKMLIPTLREMPSDAQVISHALMVRAGYVRQVSAGIYAYLPLANRTIEKFKTIMRQEFEK-IGAVEMLAPALLTADLWRESGRYETYGEDLYK--------------------LKNRDQSDF---------ILGP-----------THEETFTTLVRDAVKSYKQLPLNLYQIQSKYRDEKRPRNGLLRTREFIMKDGYSFHKDYEDLDVTYEDYRKAYEAIFTRAGLDFKGIIGDGGAMGGKDSQEFMAVTPNRTDLNRWLVLDKTIPSIDDIPEDV-LEEIKVELSAWLVSGEDTIAYSTESSYAANLEMATNEYKPSTKAATFEEVTRVETPNCKSIDEVAGFLSIDENQTIKTLLFIADEQPVVALLVGNDQVNDVKLKNYLAADFLEPASEEQAKEIFGAGFGSLGPVNLPDSVKIIADRKVQDLANAVSGANQDGYHFTGVNPERDFTAEYVDIREVKEGEISPDGKGTLKFARGIEIGHIFKLGTRYSDSMGANILDENGRSNPIVMGCYGIGVSRILSAVIEQHARLFVNKTPKGAYRFAWGINFPEELAPFDVHLITVNVKDQESQDLTEKIEADLMLKGYEVLTDDRNERVGSKFSDSDLIGLPIRVTV---GKKASEGIVEVKIKASGDTIEVHADNLIETLEILTKK---------------------- |
| 4QEI Chain:A ((1-617)) | IVDRAKMGDTLKR---------RFFYDQAFAIYGGVSGLYDFGPVGCALKNNIIQTWRQHFIQEEQILEIDCTMLTPEPVLKTSGHVDKFADFMVKDVKNGERFRADHLLKAHLQKLQQELADLFVNFNLMFKTFIGPGGNMPGYLRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMAEIEHFV------DPSEKDHPKFQNV----ADLHLYLYSAKAQVSGQSARKMRLGDAVEQGVINN-TVLGYFIGRIYLYLTKVGISPDKLRFRQHM---EDCWDAESKTSYG-WIEIVGCADRSCYDLSCHARATKVPLV---------AEKPLKEPKTVNVVQFEPSKGAIGKAY---------KKDAKLVMEYLAICDECYITEMEMLL-----------------------------------------NEKGEFT---------IETQLTKDMINVKRFQKTLYVEEV----------------------VPNVIEP-SFGLGRIMYTVFEHT--FHVREGDEQRTFF----SFPAVVAPFKCSVLPLS-QNQEFMPFVKELSEALTRHGVSHKVDDSSGSIGRRYARTDEIGVAFGVTIDFDTVNKTPHTATLRDRDSMRQIRAEISELPSIVQDLANGNITWADVEARYPLFEGQETGKK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QEI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -80973 for 3695 contacts (-21.9/contact) +
2D Compatibility (PS) -52781 + (NN) -5899 + (LL) 6632
1D Compatibility (HY) -19600 + (ID) 5050
Total energy: -157671.0 ( -42.67 by residue)
QMean score : 0.266
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