Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAQHTIDQTQVIHTKPSALSYKEKTLVMGILNVTPDSFSDGGKYDSLDKALLHAKEMIDDGAHIIDIGGESTRPGAECVSEDEEMSRVIPVIERITKELGVPISVDTYKASVADEAVKAGASIINDIWGAKHDPKMASVAAEHNVPIVLMH--------NRPERNYNDLLPDMLSDLMESVKIAVEAGVDEKNIILDPGIGFAKTYHDNLAVMNKLEIFSGLGYPVLLATSRKRFIGRVLDLP-PEERAEGTGATVCLGIQKGCDIVRVHDVKQIARMAKMMDAMLNKGGVHHG
2DZA Chain:B ((27-273))
----------------------DRVRLLGVLNLTPDS------------ALERAREMVAEGADILDLGAESTRP---PVPVEEEKRRLLPVLEAVLS-LGVPVSVDTRKPEVAEEALKLGAHLLNDVTGLR-DERMVALAARHGVAAVVMHMPVPDPATMMAHARYRDVVAEVKAFLEAQARRALSAGVPQ--VVLDPGFGFGKLLEHNLALLRRLDEIVALGHPVLVGLSRKRTIGELSGVEDPAQRVHGSVAAHLFAVMKGVRLLRVHDVR---------------------
General information:
TITO was launched using:
RESULT:
Template:
2DZA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -143382 for 1859 contacts (-77.1/contact) +
2D Compatibility (PS) -24671 + (NN) -15412 + (LL) 3532
1D Compatibility (HY) -19600 + (ID) 4850
Total energy: -204383.0 ( -109.94 by residue)
QMean score : 0.613
(partial model without unconserved sides chains):
PDB file :
Tito_2DZA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DZA-query.scw
PDB file :
Tito_Scwrl_2DZA.pdb
: