Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMETFKSILHEAQRIVVLTGAGMSTESGIPDFRSAG-GIWTE----DASRMEAM-SLDYFLSYPRLFWPKFKELFQMKMSGSFEPNEGHLLLAELEKQGKQVDIFTQNIDGLHKKAG--SRHVYELHGSIQTAACPACGARYD----LPHLLEREVPECTAAGNNGDICGTVLKTDVVLFGDAV-MHFDTLYEKLDQADLLLVIGTSLEVAPARFVPEDASLIPGMKKVIINLEPTYCDSLFDMVIHQKIGEFARSLGMKK
4O8Z Chain:A ((42-230))-----------QRVVVMVGAGISTPSGIPDF-SPGSGLYSNLQQYDLPYPEAIFELPFFFHNPKPFFTLAKELY----PGNYKPNVTHYFLRLLHDKGLLLRLYTQNIDGLERVSGIPASKLVEAHGTFASATCTVCQRPFPGEDIRADVMADRVPRCP-------VCTGVVKPDIVFFGEPLPQRFLLHVVDFPMADLLLILGTSLEVEP-------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4O8Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 780 -66213 -84.89 -378.36
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : -84.89
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.475

(partial model without unconserved sides chains):
PDB file : Tito_4O8Z.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4O8Z-query.scw
PDB file : Tito_Scwrl_4O8Z.pdb: