Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNQKHSSDFVVIKAVEDGVNVIGLTRGTDTKFHHSEKLDKGEVIIAQFTEHTSAIKVRGEALIQTAYGEMKSEKK
2ZD0 Chain:B ((5-70))------SDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSAIKVRGKAYIQTRHGVIES---


General information:
TITO was launched using:
RESULT:

Template: 2ZD0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 266 -22335 -83.96 -338.40
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain B : 0.95

3D Compatibility (PKB) : -83.96
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.95
QMean score : 0.677

(partial model without unconserved sides chains):
PDB file : Tito_2ZD0.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2ZD0-query.scw
PDB file : Tito_Scwrl_2ZD0.pdb: