Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLPKYAQVKEEISSWINQGKILPDQKIPTENELMQQFGVSRHTIRKAIGDLVSQGLLYSVQGGGTFVASRSAKSALHSNKTIGVLTTYISDYIFPSIIRGIESYLSEQGYSMLLTSTNNNPDNERRGLENLLSQHIDGLIVEPTKSALQTPNIGYYLNLEKNGIPFAMINASYAELAAPSFTLDDVKGGMMAAEHLLSLGHTHMMGIFKADDTQGVKRMNGFIQAHRERELFPSP-DMIV--TFTT-EEKESKLLEKVKATLEKNS--KHMPTAILCYNDEIALKVIDMLREMDLKVPEDMSIVGYDDSHFAQISEVKLTSVKHPKSVLGKAAAKYVIDCLEHKK-PKQEDVIFEPELIIRQSARKLNE
3H5O Chain:A ((63-333))-------------------------------------------------------------------------------RTVLVLIPSLANTVFLETLTGIETVLDAAGYQMLIGNSHYDAGQELQLLRAYLQHRPDGVLITGLSHAE-----PFERILSQHALPVVYMMDLA-DDGRCCVGFSQEDAGAAITRHLLSRGKRRIGFLGAQLDERVMKRLDGYRAALDAADCRDAGLEWLDPQPSSMQMG-----ADMLD----RALAERPDCDALFCCNDDLAIGALARSQQLGIAVPERLAIAGFNDLQPAAWCTPPLTTVATPRRDIGVHAAKALLQLIDGEEPAS-RRADLGFRLMLRRSSEG---


General information:
TITO was launched using:
RESULT:

Template: 3H5O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1492 -81393 -54.55 -308.30
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : -54.55
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.541

(partial model without unconserved sides chains):
PDB file : Tito_3H5O.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3H5O-query.scw
PDB file : Tito_Scwrl_3H5O.pdb: