Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKRPLRWLTEQITLAGMRPPISPQLLINRPAMQPVDLTGKRILLTGASSGIGAAATKQFGLHRAVVVAVARRKDLLDAVADRITGDGGTAMSLPCDLSDMEAIDALVEDVEKRIGGIDILINNAGRS-IRRPLAESLE--RWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEASPLF--SVYNASKAALSAVSRIIETEWGSQGVHSTTLYYPLVATPMIAPTKAYDGLPALTAAEAAEWMVTAARTRPVRIAPRVAVAVNALDSIGPRWVNALMQRRNEQLNP |
| 3RKR Chain:A ((27-199)) | -------------------------------------LSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPL-HTMKPAEW---DALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISS---LAGKNPVADGAAYTASK-------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RKR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -96136 for 1173 contacts (-82.0/contact) +
2D Compatibility (PS) -15906 + (NN) -3269 + (LL) 10940
1D Compatibility (HY) -9600 + (ID) 3100
Total energy: -117071.0 ( -99.80 by residue)
QMean score : 0.528
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