Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRTPRRHCRRIAVLAAVSIAATVVAGCSSGSKPSGGPLPDAKPLVEEATAQTKALKSAHMVLTVNGKIPGL-SLKTLSGDLTTNPTAATGNVKLTLGGSDIDADFVVFDGILYATLTPNQWSDFGPAADIYDPAQVLNPDTGLANVLANFADAKAEGRDTINGQNTIRISGKVSAQAVNQIAPPFNATQPVPATVWIQETGDHQLAQAQLDRGSGNSVQMTLSKWGEKVQVTKPPVS |
2BYO Chain:A ((20-207)) | ------------------------------------SDPALLAEIRQSLDATKGLTSVHVAVRTTGKVDSLLGITSADVDVRANPLAAKGVCTYNDEQ---GVPFRVQGDNISVKL-FDDWSNLGSISELSTS------RVGVTQLLSGVTNLQAQGTEVIDGISTTKITGTIPASSVKMLDP--GAKSARPATVWIAQDGSHHLVRASIDLGS-GSIQLTQSKWNEPVNVD----- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2BYO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -40639 for 1332 contacts (-30.5/contact) +
2D Compatibility (PS) -19736 + (NN) -6384 + (LL) 2472
1D Compatibility (HY) -8800 + (ID) 2800
Total energy: -75887.0 ( -56.97 by residue)
QMean score : 0.344
|
|
|