Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSVANLKDLLAEGVSGRGVLVRSDLNVPLDEDGTITDAGRIIASAPTLKALLDADAKVVVAAHLGRPKDGPDPTLSLAPVAVALGEQLGRHVQLAGDVVGADALARAEGLTGGDILLLENIRFDKRETSKND---DDRRALAKQLVELVGTGGVFVSDGFGVVHRKQASVYDIATLLPHYAGTLVADEMRVLEQLTSSTQRPYAVVLGGSKVSDKLGVIESLAT--KADSIVIGGGMCFTFLAAQGFSVGTSLLED-------DMIEVCRGLLETYHDVLRLPVDLVVTEKFAADSPPQTVDVGAVPNGLMGLDIGPGSIKRFSTLLSNAGTIFWNGPMGVFEFPAYAAGTRGVAEAIVAATGKGAFSVVGGGDSAAAVRAMNIPEGAFSHISTGGGASLEYLEGKTLPGIEVLSREQPTGGVL |
| 2CUN Chain:A ((2-404)) | ---FRLEDF---NFHNKTVFLRVDLNSPMK-DGKIISDARFKAVLPTIRYLIESGAKVVIGTHQGKPYSE--DYTTTEEHARVLSELLDQHVEYIEDIFGRYAREKIKELKSGEVAILENLRFSAEEVKNKPIEECEKTFLVKKLSKV---IDYVVNDAFATAHRSQPSLVGFARIKPMIMGFLMEKEIEALMRAYYSKDSPKIYVLGGAKVEDSLKVVENVLRRERADLVLTGGLVANVFTLAKGFDLGRKNVEFMKKKGLLDYVKHAEEILDEFYPYIRTPVDFAVDYKGERVEIDLLSENRGLLHQYQIMDIGKRTAEKYREILMKARIIVANGPMGVFEREEFAIGTVEVFKAIAD-S--PAFSVLGGGHSIASIQKYGI--TGITHISTGGGAMLSFFAGEELPVLRALQISYEK---- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2CUN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -264461 for 3604 contacts (-73.4/contact) +
2D Compatibility (PS) -42137 + (NN) -14988 + (LL) 780
1D Compatibility (HY) -25600 + (ID) 6450
Total energy: -352856.0 ( -97.91 by residue)
QMean score : 0.607
|
|
|