Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKAIFITGAGSGMGREGATLFHANGWRVGAIDRNEDGLAALRVQLGAERLWARAVDVTDKAALEGALADFCAGNVGGGLDMMWNNAGIGEGGWFEDVPYEAAVRVVDVNFKAVLTGAYAALPYLKKAPGSLMFSTSSSSGTYGMPRIAVYSATKHAVKGLTEALSVEWQRHGVRVADVLPGLIDTAIL---TSTRQHSDEGPYTISAEQIRAAAPKKGMFRLMPSSSVAEAAWRAYQHPTRLHWYVPRSIRWIDRLKGVSPEFVRRHIAKSLATLEPKRK |
4BMS Chain:B ((7-200)) | -KTAVITGGNSGIGLATAKRFVAEGAYVFIVGRRRKELEQAAAEIG-RNVTAVKADVTKLEDLDRLYA--IVREQRGSIDVLFANSGAIEQKTLEEITPEHYDRTFDVNVRGLIFTVQKALPLLRDG-GSVIL-TSSVAGVLGLQAHDTYSAAKAAVRSLARTWTTELKGRSIRVNAVSPGAIDTPIIENQV-TQEEADE-------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BMS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -79532 for 1524 contacts (-52.2/contact) +
2D Compatibility (PS) -20413 + (NN) -9161 + (LL) 6304
1D Compatibility (HY) -9600 + (ID) 3150
Total energy: -115552.0 ( -75.82 by residue)
QMean score : 0.373
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