Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MASLQQSRRLVTEIPGPASQALTHRRAAAVSSGVGVTLPVFV------ARAGGGIVEDVDGNRLIDLGSGIAVTTIGNSSPRVVDAVRTQVAEFTHTCFMVTPYEGYVAVAEQLNR-ITPGSGPKRSVLFNSGAEAVENAVKIARSYTG------KPAVVAFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEIYRAPLSYPYRDGLLDKQLATNGELAAARAIGVIDKQVGANNLAALVIEPIQGEGGFIVPAEGFLPALLDWCRKNHVVFIADEVQTGFARTGAMFACEHEGPDGLEPDLICTAKGIADGLPLSAVTGRAEIMNAPHVGGLGGTFGGNPVACAAALATIATIESDGLIERARQIERLVTDRLTTLQAVDDRIGDVRGRGAMIAVELVKSGTTEPD-AGLTERLATAAHAAGVIILTCGMFGNIIRLLPPLTIGDELLSEGLDIVCAILADL |
| 4JEY Chain:A ((21-408)) | -------------------------TAITRATFDEVILPVYAPADFIPVKGKGSRVWDQQGKEYIDFAGGIAVTALGHCHPALVEALKSQGETLWHTSNVFTNEP-----ALRLGRKLIDATFAERVLFMNSGTEANETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQP-KYSDGFGPKPADIIHVPFN----------------DLHAVKA--VMD-----DHTCAVVVEPIQGAGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDLFAYMHYG---VTPDILTSAKALGGGFPVSAMLTTQEIASAF----HGSTYGGNPLACAVAGATFDIINTPEVLQGIHTKRQQFVQHLQAIDEQFDIFSDIRGMGLLIGAEL------KPKYKGRARDFLYAGAEAGVMVLNAG--ADVMRFAPSLVVEEADIHEGM---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JEY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -194951 for 3260 contacts (-59.8/contact) +
2D Compatibility (PS) -40963 + (NN) -23211 + (LL) 4600
1D Compatibility (HY) -26000 + (ID) 6550
Total energy: -287075.0 ( -88.06 by residue)
QMean score : 0.528
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