Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGLNADWMQRDLNVLWHPCTQMKDHERLPVIPIRRGEGVWLEDFEGKRYIDAVSSWWVNVFGHANPRINQRIKDQVDQLEHVILAGFSHQPVIELSERLVKITPPG-LDRVFYADSGSAGIEVALKMSYHFWLNSGRPRKKRFVTLTNSYHGETIAAMSVGDVALFTETYKSLLLDTIKVPSPDCFLRPDGMCWEEHSRNMFAHMERTLAEGHDEIAAVIVEP-LIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGTMFACE-QAGIAPDFLCLSKALTGGYLPMSAVLTSETIYRGFYDDYQTLRAFLHSHTYTGNPLACAAALATLDIFEEDKVIEANRALSTHMARATAHLADHPHVAEVRQTGMVLAIEMVQDKASRTP--YPWQERRGLKVFQHGLERGALLRPLGSVVYFLPPYVITPEQIDFLAEVASEGIDIATRDAVSVAVSDFHPDHRDPG |
| 3DOD Chain:A ((3-445)) | ----HDLIEKSKKHLWLPFTQMKDYDE-NPLIIESGTGIKVKDINGKEYYDGFSSVWLNVHGHRKKELDDAIKKQLGKIAHSTLLGMTNVPATQLAETLIDIS-PKKLTRVFYSDSGAEAMEIALKMAFQYWKNIGKPEKQKFIAMK-----------------------------SYKAPIPYVYRSESGD-PDECRDQCLRELAQLLEEHHEEIAALSIESMV-QGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGKMFACEHE-NVQPDLMAAGKGITGGYLPIAVTFATEDIYKAFYDDYENLKTFFHGHSYTGNQLGCAVALENLALFESENIVEQVAEKSKKLHFLLQDLHALPHVGDIRQLGFMCGAELVRSKETKEPYPADRRIG--YKVSLKMRELGMLTRPLGDVIAFLPPLASTAEELSEMVAIMKQAIHEVTSLED--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DOD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -291179 for 3480 contacts (-83.7/contact) +
2D Compatibility (PS) -44557 + (NN) -19420 + (LL) 3320
1D Compatibility (HY) -33200 + (ID) 7950
Total energy: -392986.0 ( -112.93 by residue)
QMean score : 0.510
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