Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVAITHTPKLKHLDKLLAHCHRRRYTAKSTIIYAGDRCETLFFIIKGSVTILIEDDDGREMIIGYLNSGDFFGELGLFEKEGSEQERSAWVRAKVECEVAEISYAKFRELSQQDSEILYTLGSQMADRLRKTTRKVGDLAFLDVTGRVARTLLDLCQQPDAMTHPDGMQIKITRQEIGRIVGCSREMVGRVLKSLEEQGLVHVKGKTMVVFGTR
1O3R Chain:A ((4-200))
------------LEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFE-EG--QERSAWVRAKTACEVAEISYKKFRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFLDVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLEDQNLISAHGKTIVVYG--
General information:
TITO was launched using:
RESULT:
Template:
1O3R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -135128 for 1413 contacts (-95.6/contact) +
2D Compatibility (PS) -21265 + (NN) -4322 + (LL) 1396
1D Compatibility (HY) -24400 + (ID) 6650
Total energy: -190369.0 ( -134.73 by residue)
QMean score : 0.577
(partial model without unconserved sides chains):
PDB file :
Tito_1O3R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1O3R-query.scw
PDB file :
Tito_Scwrl_1O3R.pdb
: