Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTAESPTIRLERYSERHVEGLTALYNDPAV-ARQVLQMPYQSVEQRRKRLHDSADDDRLLILVALHQGDVIGSASLEQHPRIRRSHSGSIGMGVAVAWQGKGVGSRLLGELLDIADNWMNLRRVELTVYTDNAPALALYRKFGFETEGEMRDYAVRDGRFVDVYSMARLRRVEGRVGE
2GE3 Chain:A ((6-168))
-----DTVTIKPIRAEHVESFHRALDAVSRERKYLSFLEAPPLEAVRAFVLDMIE-NDHPQFVAIADGDVIGWCDIRRQDRATRAHCGTLGMGILPAYRNKGLGARLMRRTLDAAHE-FGLHRIELSVHADNARAIALYEKIGFAHEGRARDAVSIDGHYIDSLNMAIIFG-------
General information:
TITO was launched using:
RESULT:
Template:
2GE3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72870 for 1167 contacts (-62.4/contact) +
2D Compatibility (PS) -16974 + (NN) -2797 + (LL) 904
1D Compatibility (HY) -9200 + (ID) 2700
Total energy: -103637.0 ( -88.81 by residue)
QMean score : 0.479
(partial model without unconserved sides chains):
PDB file :
Tito_2GE3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GE3-query.scw
PDB file :
Tito_Scwrl_2GE3.pdb
: