Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIRSQVGMVLNLDKCIGCHTCSITCKNVWTSREGMEYAWFNNVETKPGIGYPKEWENQEKWKGGWVRAADGSIRPRIGGKFRVLANIFANPDLPEIDDYYEPFDFDYQHLHTAPKAEHQPVARPRSLVSGQRMEKIEWGPNWEEILGTEFAKRRKDKNFDQVQADIYGEYENTFMMYLPRLCEHCLNPACVASCPSGAIYKREEDGIVLIDQDKCRGWRMCISGCPYKKIYFNWKSGKSEKCIFCYPRIEAGQPTVCSETCVGRIRYLGVLLYDADRIHEVASCENERELYEKQLEIFLDPFDPAVIAQARKDGVADSVIEAAQKSPVYKLAMDWKLALPLHPEYRTLPMVWYVPPLSPIQNAAAEGHIGSDGVIPDVESLRIPVQYLANLLTAGDTAPVLLALKRLLAMRAYKRAEHVEGRQDLEVLAKVGLSVEQVEEMYRYLAIANYEDRFVIPSAHREEALSDAFAERSGCGFSFGNGCSGGSNSAVNLFGGKPTNRRDVIQVVQIQE |
| 2IVF Chain:B ((16-349)) | ---KRQLVTVIDLNKCLGCQTCTVACKNIWTKRPGTEHMRWNNVTTYPGKGYPRDYER---KGGGFLRG---EPQ---------------PGVLPTLIDSGDDFQFNHKEVFYEGKG-QTVHFHPTSKSTGKD---PAWGYNWDEDQGGGKWP-------------------NPFFFYLARMCNHCTNPACLAACPTGAIYKREDNGIVLVDQERCKGHRHCVEACPYKAIYFNPVSQTSEKCILCYPRIEKGIANACNRQCPGRVRAFGYLD----------------------------D----------------------TTSHVHKLVKKWKVALPLHAEYGTGPNIYYVPPMGARGFGEDG---------EITDKTRIPLDVLEGLFGPE----VKRVLAVLHTERENMRAGR-------------------GSELMDLLISKKWSDRFGGFTNDPL-------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IVF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -181016 for 2797 contacts (-64.7/contact) +
2D Compatibility (PS) -33785 + (NN) -8510 + (LL) 11012
1D Compatibility (HY) -19200 + (ID) 7000
Total energy: -238499.0 ( -85.27 by residue)
QMean score : 0.259
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