Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSSTIHPLPSFGLGTFRLTGQVVVDSVRSALELGYRAIDTAQIYGNEADIGRAIAES----GVPRSELFLTTKVWVDNYAREKLLASLRESLEKLRTDRLDLVLIHWPA---PG--------------NGVELGEYMAALAEAKSLGLTRRIGVSNFNIELTRQAIAAVGAG-EISTNQIELSPYLQNRALTAYLEEQGIAVTSYMTLA-----YGK-----VLKDPTLAGIAARHRATVAQVALAWAMQLGYAVIPSSTRRENLASNLLARDLRLDAEDMARIAGLERNGREVSPQGLAPAWD
3LD5 Chain:A ((13-297))-------MPILGLGTWKSPPGQVTEAVKVAIDVGYRHIDCAHVYQNENEVGVAIQEKLREQVVKREELFIVSKLWCTYHEKGLVKGACQKTLSDLKLDYLDLYLIHWPSGFKPGKEFFPLDESGNVVPSDTNILDTWAAMEELVDEGLVKAIGISNFNHLQVEMILNKPGLKYKPAVNQIECHPYLTQEKLIQYCQSKGIVVTAYSPLGSPDRPWAKPEDPSLLEDPRIKAIAAKHNKTTAQVLIRFPMQRNLVVIPKSVTPERIAENFKVFDFELSSQDMTTLLSYNRNWR------------


General information:
TITO was launched using:
RESULT:

Template: 3LD5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -145875 for 2095 contacts (-69.6/contact) +
2D Compatibility (PS) -27653 + (NN) -10999 + (LL) 792
1D Compatibility (HY) -21200 + (ID) 4800
Total energy: -209735.0 ( -100.11 by residue)
QMean score : 0.590

(partial model without unconserved sides chains):
PDB file : Tito_3LD5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3LD5-query.scw
PDB file : Tito_Scwrl_3LD5.pdb: