Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSELNLTTDEARVSYGIGRQLGDQLRENPVPGMTLDAVLAGLSDAFAGIDSRVSGEALSASFQVIRERMQAEAQAKAEAAAGEGRAYLAENAKREGVTVLPSGLQFEVLSTG-EGAKPSREDTVRTHYHGTLIDGTVFDSSYQRGQPAEFPVGG--VIAGWVEALQLMNAGSKWRLHVPSELAYGGQA-VGSIPPHSVLVFDVELLEIL
3UQI Chain:A ((2-107))
------------------------------------------------------------------------------------------------------GVQVVTLAAGDEATYPKAGQVAVVHYTGTLADGKVFDSSRTRGKPFRFTVGRGEVIRGWDEGVAQMSVGQRAKLVCSPDYAYGSRGHPGVIPPNATLTFDVELLRV-
General information:
TITO was launched using:
RESULT:
Template:
3UQI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -62868 for 756 contacts (-83.2/contact) +
2D Compatibility (PS) -10995 + (NN) -1677 + (LL) 7204
1D Compatibility (HY) -6000 + (ID) 2300
Total energy: -76636.0 ( -101.37 by residue)
QMean score : 0.582
(partial model without unconserved sides chains):
PDB file :
Tito_3UQI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UQI-query.scw
PDB file :
Tito_Scwrl_3UQI.pdb
: