Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSNPQYPTRLPCGSRVLDLARPHVMGILNVTPDSFSDGGRYDRLDDALRHAERMVLEGATLIDVGGESTRPGARSVSPTEELERVAPVVERIARELDVVISVDTSTPAVMRETARLGAGLINDVRSLQRDGALDAAVDSGLAVCLMHMR-------------------GEPQTMQDAPAYQDVVAE--VGAFLQERVDACVAAGIDRERLLLDPGFGFAKTLEHNLVLFRHLQALHGLGLPLLVGVSRKSMIGKVL---GREVD--------ERLYGSLALAALALAKGARIIRVHDVAATVDVMRMISAVEMAD |
| 2VEG Chain:A ((8-303)) | -------------------AKTVICGIINVTP---------FALEQALQQARKLIAEGASMLDIGGE-----SSYVEIEEEIQRVVPVIKAIRKESDVLISIDTWKSQVAEAALAAGADLVNDITGLMGDEKMPHVVAEARAQVVIMFNPVMARPQHPSSLIFPHFGF--AFT--ELADFETLPIEELMEAFFERALARAAEAGIAPENILLDPGIGFGLTKKENLLLLRDLDKLHQKGYPIFLGVSRKRFVINILEENGFEVNPETELGFRNRDTASAHVTSIAARQGVEVVRVHDVASHRMAVEIASAIRLAD |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VEG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -175683 for 2076 contacts (-84.6/contact) +
2D Compatibility (PS) -27377 + (NN) -18847 + (LL) 488
1D Compatibility (HY) -21200 + (ID) 4550
Total energy: -247169.0 ( -119.06 by residue)
QMean score : 0.528
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