Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIRIIGSVGSGKTTLAKKLSEWYQIDYFETDRIVWKREG--IE----VR--------RTDIEKIAVLNKIL-----QQENWIIEGVHLEAWV----NESFDQADVIIFLNLPKKQIRSQLIKRQIKQLLRLEAAHYQVKLNMLNKMFYWDDLFDQRTKPLIAEKMAQTPTKWLVVTEKTALQEIQKKLLQIISSRDIL
2C95 Chain:A ((10-194))
NIIFVVGGPGSGKGTQCEKIVQKYGYTHLSTGDLLRSEVSSGSARGKKLSEIMEKGQLVPLETVLDMLRDAMVAKVNTSKGFLIDGYPREVQQGEEFERRIGQPTLLLYVDAGPETMTQRLLKRGETS--GRVDDNEETI-------KKRLETYYKATEPVIAFY-EK-RGIVRKVNAEGSVDSVFSQVCTHLDAL---
General information:
TITO was launched using:
RESULT:
Template:
2C95.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61616 for 1183 contacts (-52.1/contact) +
2D Compatibility (PS) -17697 + (NN) -8743 + (LL) 1588
1D Compatibility (HY) -5200 + (ID) 1150
Total energy: -92818.0 ( -78.46 by residue)
QMean score : 0.552
(partial model without unconserved sides chains):
PDB file :
Tito_2C95.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2C95-query.scw
PDB file :
Tito_Scwrl_2C95.pdb
: