Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKYIKADRFFYAD-HVKENGYLEIKDNHFGKWIENISGQEEILDYSGYQIAPGLVDTHIHGFAGADVMDCDSEGILRMSAGLLSTGVTSFLPTTLTSDTKRLEEASKSVAAVAGKEQGAKIQGIYFEGPYFTEEYKGAQNPIYMRNPNLEEFAQWQKAAKGLITKIALAPEREGVEEFVSAITKQGVTVALGHSNGTYKEAKKAVKAGASVWVHAYNGMRGLTHREPGMVGAVYNLPNTYAELICDGHHVDPVACDILMTQKGHNHV----ALITDCMAAGGAPDGDYMLGELPVVVSNGTARLKDGGNLAGSILKLKDGLKNVVEWGIATPEEAVRMASYVPAVSVGIDNVCGQIKEGYAADFIVLDKHLDLVATYLDGEKRWQS |
| 1O12 Chain:A ((13-375)) | --MIVEKVLIVDPIDGEF-TGDVEIEEGKIVKVEKRE-------CIPRGVLMPGFVDPHIHGVVGADTMN---CDFSEMEEFLYSQGVTTFLATTVSTSLEKMKEILRKARDYILENPSTSLLGVHLEGPYISKEKKGAHSEKHIRPPSERELSEI----DSPAKMLTFAPEIESSEL-LLRLVKRDIVLSAGHSIATFEEFMKFYKEGVKRITHFPNGLKPLHHREIGITGAGLLLDDVKLELICDGVHLSREMVKLVYKVKKANGIVLVTDSISAAGLKDGTT----TLGDLVVKVKDGVPR-LEDGTLAGSTLFFSQAVKNFRKFTGCSITELAKVSSYNSCVELGLD-DRGRIAEGTRADLVLLDEDLNVVMTIKEGEVVFRS |
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General information:
TITO was launched using:
| RESULT:
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Template: 1O12.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -185066 for 3241 contacts (-57.1/contact) +
2D Compatibility (PS) -38597 + (NN) -13186 + (LL) 1292
1D Compatibility (HY) -17200 + (ID) 5500
Total energy: -258257.0 ( -79.68 by residue)
QMean score : 0.487
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