Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFNIILAMVCALIGLIIGYVAISMKMKSSKEAAELTLLNAEQDAVDLRGKAEIEAEHIRKAAERESKAHQKELLLEAKEEARKYREEIEKEFKSDRQELKQMEARLTDRASSLDRKDENLSNKEKMLDSKEQSLTDKSRHINEREQEIATLETKKVEELSRIAELSQEEAKDIILADTEKDLAHDIATRIKEAEREVKDRSNKIAKDLLAQAMQRLAGEYVTEQTITTVHLPDDNMKGRIIGREGRNIRTLESLTGIDVIIDDTPEVVVLSGFDPIRREIARMT-----LESLIQDGRIHPARIEELVEKNRLEMDQRIREYGEAAAYEIGAPNLHPDLIKIMGRLQFRTSYGQNVLRHSVEVGKLAGILAGELG----ENVDLARRAGFLHDMGK---------------AIDREVEGSHVEIGMEFARKYKEHPIVVNTIASHH--------------GDVEPDSVIAVIVAAADALSSARPGARNESMENYIKRLRDL--EEIANGFEGVQNAFALQAGREIRIMVQPGKVSDDQVVIMSHKVREKIEQNLDYPGNIKVTVIREMRAVDFAK |
| 3TM8 Chain:A ((20-328)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HMDYVSIRVSTLR--GDQKIDFNAYVKINDKMILYLRRGDSFEGERLKRLKDKKLRKMYILTDEENSYRTYLQKNIETAYDDTTGKDIQTRADIIQGSQQNNAEEVFENPE--NVESYNYCKDAAGKYVNFIMSNAQALSAVMNIENTDKT---ISHHGVTVSTLSIALAQKLGITDPKKTQLLTLGALLHDYGHHHSPLNLNQPLDSMSPEDLALWKKHPIEGAQKVQDKKHFDQTVINIIGQHEETINGTGPKGLREKDMDPLAVLVSSANAMDRLITFEGVPKAEAAKKLMIDHVGKHPLQHIQHLNDILKGL---------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TM8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -74283 for 2167 contacts (-34.3/contact) +
2D Compatibility (PS) -28167 + (NN) -5904 + (LL) 24032
1D Compatibility (HY) 400 + (ID) 1950
Total energy: -85872.0 ( -39.63 by residue)
QMean score : 0.291
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