Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKGLLVMDVDSTLIMEEAIDLLAIEAGVGKQVAALTDAAMRGELDFEEALKKRVALLKGLPVTILTDILSSIHFTPGAYELIKECHKRQMKVGLVSGGFHETIDILAKQLQVDYVKANRLGVKGGFLTGEVEGEIVTKEVKKIKLKEWASENHLDLSQTIAMGDGANDLPMIKSAGVGIAFCAKPIVREEAAYQINEKNLLKVFDIIDANEN
3N28 Chain:A ((105-315))
TKPGLIVLDMDSTAIQIECIDEIAKLAGVGEEVAEVTERAMQGELDFEQSLRLRVSKLKDAPEQILSQVRETLPLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSGKLTGQVLGEVVSAQTKADILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAYHAKPKVEAKAQTAVRFAGLGGVVCILSAALV
General information:
TITO was launched using:
RESULT:
Template:
3N28.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -121753 for 1758 contacts (-69.3/contact) +
2D Compatibility (PS) -23390 + (NN) -12915 + (LL) 0
1D Compatibility (HY) -15200 + (ID) 4350
Total energy: -177608.0 ( -101.03 by residue)
QMean score : 0.613
(partial model without unconserved sides chains):
PDB file :
Tito_3N28.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3N28-query.scw
PDB file :
Tito_Scwrl_3N28.pdb
: