Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSLIGKEVLPFEAKAFKNGEFIDVTNEDLKGQWSVFCFYPADFSFVCPTELEDLQEQYAALKELGVEVYSVSTDTHFVHKGWHDSSEKISKITYAMIGDPSQTISRNFDVLDEETGLADRGTFIIDPDGVIQTVEINAGGIGRDASNLVNKVKAAQYVRQNPGEVCPAKWEEGGETLTPSLDLVGKI
4XRD Chain:C ((1-171))-SLINTKIKPFKNQAFKNGEFIEVTEKDTEGRWSVFFFYPADFTFVCPTELGDVADHYEELQKLGVDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQYVAAHPGEVCPAKFKE---------------


General information:
TITO was launched using:
RESULT:

Template: 4XRD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 841 -83641 -99.45 -489.13
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain C : 0.89

3D Compatibility (PKB) : -99.45
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.89
QMean score : 0.634

(partial model without unconserved sides chains):
PDB file : Tito_4XRD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4XRD-query.scw
PDB file : Tito_Scwrl_4XRD.pdb: