Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSIQNSSARRRSAGRIVYAAGAVLWRPGSADSEGPVEIAVIHRPRYDDWSLPKGKVDPGETAPVGAVREILEETGHRANLGRRLLTVTYPTDSPFRGVKKVHYWAARSTGGE-------------FTPGSEVDELIWLPVPDAMNKLDYAQDRKVLCRFAKHP----ADTQTVLVVRHGTAGSKAHFSGDDSKRPLDKRGRAQAEALVPQLLAFGATDVYAADRVRCHQTMEPLAAELNVTIHNEPTLTEESYANN----PKRGRHRVLQIVEQVGTPVICTQGKVIPDLITWWCERDGVHP-------DKSRNRKGSTWVLSLSAG--RLVTADHIGGALAANVRA |
| 3FJY Chain:A ((38-349)) | -----------------------------------IEVCIVHRPKYDDWSWPKGKLEQNETHRHAAVREIGEETGSPVKLGPYLCEVE-----------HTLYWMAQPISADDAEHLLDAFGPVHRADVGEINDIVWVSVREARKILSHSTDKDTLAVFVDRVQEGAATAQNLLIVRHAKAESRKSWKGTDANRPITPKGAAMAFALNRELACFNPTRLATSPWLRCQETLQVLSWQTERPMEHINTLTEDAFAEHPAVSWLAFREQITQTLNSRETTAICMHRPVIGGMYDHLRGLCARKQLAKQLIAKSPYMPTGTAMSLFIIDTPQGPSIIDIQ---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FJY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -115309 for 2023 contacts (-57.0/contact) +
2D Compatibility (PS) -28350 + (NN) -8978 + (LL) 2416
1D Compatibility (HY) -12000 + (ID) 3900
Total energy: -166121.0 ( -82.12 by residue)
QMean score : 0.429
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