Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MP-NFSGNWKIIRSENFEEMLKALGVNMMMRKIAVAAASKPAVEIKQENDTFYIKTSTTVRTTEINFKIGEEFEEQTVDGRPCKSLVKWESGNKMVCEQRLLKGEGPKTSWSRELTNDGELILTMTADDVVCTRVYVRE
4A60 Chain:A ((23-153))
MVEPFLGTWKLVSSENFEDYMKELGVNFAARNMA--GLVKPTVTISVDGKMMTIRTESSFQDTKISFKLGEEFDETTADNRKVKSTITLE-NGSMIHVQ---KWLGKETTIKRKIV-DEKMVVECKMNNIVSTRIYEK-
General information:
TITO was launched using:
RESULT:
Template:
4A60.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34819 for 931 contacts (-37.4/contact) +
2D Compatibility (PS) -14541 + (NN) -4169 + (LL) 784
1D Compatibility (HY) -11200 + (ID) 2450
Total energy: -66395.0 ( -71.32 by residue)
QMean score : 0.508
(partial model without unconserved sides chains):
PDB file :
Tito_4A60.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4A60-query.scw
PDB file :
Tito_Scwrl_4A60.pdb
: