Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRLSVLLSLLPLALGAPAVEQRSEAAPLIEARGEMVANKYIVKFKEGSALSALDAAMEKISGKPDHVYKNVFSGFAATLDENMVRVLRAHPDVEYIEQDAVVTINAAQTNAPWGLARISSTSP-GTSTYYYDESAGQGSCVYVIDTGIEASHPEFEGRAQMVKTYYYSS---RDGNGHGTHCAGTVGSRTYGVAKKTQLFGVKVLDDNGSGQYSTIIAGMDFVASDKNNRNCPKGVVASLSLGGGYSSSVNSAAARLQSSGVMVAVAAGNNNADARNYSPASEPSVCTVGASDRYDRRSSFSNYGSVLDIFGPGTSILSTW--IGGSTRSISGTSMATPHVAGLAAYLMTL-GKTTAASACRYIADTANKGDLSNIPFGTVNLLAYNNYQA |
| 2B6N Chain:A ((1-278)) | ---------------------------------------------------------------------------------------------------------ADQPSPTWGIDRIDQRNLPLDNNYHTD-YDGSGVTAFVIDTGVLNTHNEFGGRASSGYDFIDNDYDATDCNGHGTHVAGTIGGSTYGVAKNVNVVGVRVLNCSGSGSNSGVIAGINWVKNNA-----SGPAVANMSLGGGASQATDDAVNAAVAAGITFVVAAGNDNSNACNYSPARAADAITVGSTTSNDSRSSFSNYGTCLDIYAPGSSITSSWYTSNSATNTISGTSMASPHVAGVAALYLDENPNLSPAQVTNLLKTRATADKVTDAKTGSPNKLLFSLA-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2B6N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -133201 for 2671 contacts (-49.9/contact) +
2D Compatibility (PS) -29660 + (NN) -14119 + (LL) 8988
1D Compatibility (HY) -12000 + (ID) 5650
Total energy: -185642.0 ( -69.50 by residue)
QMean score : 0.558
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