Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKPGGNTIVIWMYAVATWLCFGSTSGWSFTLEDNNIFPKQYPIINFTTAGATVQSYTNFIRAVRGRLTTGADVRHEIPVLPNRVGLPINQRFILVELSNHAELSVTLALDVTNAYVVGYRA---GN-SAYFFHPDNQ-EDAEAITHLFTDVQNR--YTFAFGGNYDRLEQLAG-NLRENIELGNGPLEEAISALYYYSTGGTQLPTLARSFIICIQMISEAARFQYIEGEMRTRIRYNRRSAPDPSVITLENSWGRLSTAIQESNQGAFASPIQLQRRNGSKFSVYDVSILIPIIALMVYRCAPPPSSQFSLLIRPVVPNFNADVCMDPEPIVRIVGRNGLCVDVRDGRFHNGNAIQLWPCKSNTDANQLWTLKRDNTIRSNGKCLTTYGYSPGVYVMIYDCNTAATDATRWQIWDNGTIINPRSSLVLAATSGNSGTTLTVQTNIYAVSQGWLPTNNTQPFVTTIVGLYGLCLQANSGQVWIEDCSSEKAEQQWALYADGSIRPQQNRDNCLTSDSNIRETVVKILSCGPASSGQRWMFKNDGTILNLYSGLVLDVRASDPSLKQIILYPLHGDPNQIWLPLF |
| 2Z4U Chain:A ((2-255)) | -----------------------------------------NTITFDVGNATINKYATFMESLRNEAKDPTLKCYGIPMLPDS---NLTPKYVLVKLQDASSKTITLMLRRNNLYVMGYSDLYNGKCRYHIFNDISSTESTDVENTLCPNSNSREKKAINYNSQYSTLQNKAGVSSRSQVQLGIQILNSDIGKISGVST--FTDKTEAEFLLVAIQMVSEAARFKYIENQVKTNFNRA--FNPNPKVLSLEENWGKISLAIHNAKNGALTSPLELKNADDTKWIVLRVDEIKPDMGLLNYVS------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Z4U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -178016 for 1945 contacts (-91.5/contact) +
2D Compatibility (PS) -25796 + (NN) -1 + (LL) 16688
1D Compatibility (HY) -17600 + (ID) 3700
Total energy: -208425.0 ( -107.16 by residue)
QMean score : 0.310
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