Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVGSLNCIVAVSQNMGIGKNGDLPWPPLRNEFRYFQRMTTTSS-------------------VEGKQNLVIMGKKTWFSIPEKNRPLKGRINLVLSRELKEP--PQGAHFLSRSLDDALKLTEQPELANKVDMVWIVGGSSVYKEAMNHPGHLKLFVTRIMQDFESDTFFPEIDLEKYKLLPEYPGVLSDVQEEKGIKYKFEVYEKND
2BL9 Chain:A ((24-238))
-AGTKNEPFSPRTFRGLGNKGTLPWKCNSVDMKYFSSVTTYVDESKYEKLKWKRERYLRMEA--KLQNVVVMGRSSWESIPKQYKPLPNRINVVLSKTLTKEDVKEKV-FIIDSIDDLLLLLKK----LKYYKCFIIGGAQVYRECLSRNLIKQIYFTRINGAYPCDVFFPEFDESEFRVTSV-----SEVYNSKGTTLDFLVYSKV-
General information:
TITO was launched using:
RESULT:
Template:
2BL9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46942 for 1158 contacts (-40.5/contact) +
2D Compatibility (PS) -18426 + (NN) -6732 + (LL) 904
1D Compatibility (HY) -13600 + (ID) 3000
Total energy: -87796.0 ( -75.82 by residue)
QMean score : 0.554
(partial model without unconserved sides chains):
PDB file :
Tito_2BL9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BL9-query.scw
PDB file :
Tito_Scwrl_2BL9.pdb
: