Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MWPNGSSLGPCFRPTNITLEERRLIASPWFAASFCVVGLASNLLALSVLAGARQGGSHTRSSFLTFLCGLVLTDFLGLLVTGTIVVSQHAALFEWHAVDPGCRLCRFMGVVMIFFGLSPLLLGAAMASERYLGITRPFSRPAVASQRRAWATVGLVWAAALALGLLPLLGVGRYTV--------------QYPGSWCFLTLGAESG--DVAFGLLFSMLGGLSVGLSFLLNTVSVATLCHVYH--------------------------GQEAAQQRPRDSEVEMMAQLLGIMVVASVCWLPLLVFIAQTVLRNPPAMSPAG-QLSRTTEKELLIYLRVATWNQILDPWVYILFRRAVLRRLQPRLSTRPRSLSLQPQLTQRSGLQ |
| 4XNV Chain:A ((38-382)) | -------SFKC----ALTKTGFQFYYLPAVYILVFIIGFLGNSVAIWMFVFHMK----PWSGISVYMFNLALADFLYVLTLPALIFYYFNKT-DWIFGDAMCKLQRFIFHVNLY---GSILFLTCISAHRYSGVVYPKS-LGRLKKKNAICISVLVWLI-VVVAISPILFYSGTGVRKNKTITCYDTTSDEYLRSYFIYSMCTTVAMFCVPLVLILGCYGLIVRALIYKMKKYTCTVCGYIYNPEDGDPDNGVNPGTDFKDIVCPLCGVGKDQFEEVEEPLRRKSIYLVIIVLTVFAVSYIPFHVMKTMNLRARLDFQTPAMCAFNDRVYATYQVTRGLASLNSCVNPILYFLAGDTFRRR------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XNV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -205377 for 2148 contacts (-95.6/contact) +
2D Compatibility (PS) -30564 + (NN) -10556 + (LL) 1700
1D Compatibility (HY) -26400 + (ID) 2700
Total energy: -273897.0 ( -127.51 by residue)
QMean score : 0.234
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