Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLTKPLQGPPAPPGTPTPPPGGKDREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILEAELHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQT---PAEDVPLNPSKGGPAPLAWSLLP
2XIX Chain:A ((21-294))
--------------------------PLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG--FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS-ECQHLIRWCLALRP-DRPTFEEIQNHPWMQDVLLPQETAEIHLHS------------
General information:
TITO was launched using:
RESULT:
Template:
2XIX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -165717 for 2211 contacts (-75.0/contact) +
2D Compatibility (PS) -28721 + (NN) -16831 + (LL) -1044
1D Compatibility (HY) -27200 + (ID) 7200
Total energy: -246713.0 ( -111.58 by residue)
QMean score : 0.408
(partial model without unconserved sides chains):
PDB file :
Tito_2XIX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XIX-query.scw
PDB file :
Tito_Scwrl_2XIX.pdb
: