Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLRIIAGKYRGRRIATGKHLAARPTMSIVREAVFNILSSKKIIYNLNILDLFCGSGSFSFEALSRGAKHAFIVDLDYYNLQLPEKTAKDLGITD-SITLICCSANALPK-----PVSKCDIVFIDPPYYSNLV---------NSTLDGLANSGWLSDDALIILEVRKNEDFQCSKNFSVILERTYGIARIIFLSLST
2B78 Chain:A ((211-336))
------------------------------------------AAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHH-LTYDIIIIDPPSF----EVFSVSKDYHKLIRQ--GLEILSENGLIIASTNAANMTVSQFKKQIEKGFGKQKHTYLDLQQLP
General information:
TITO was launched using:
RESULT:
Template:
2B78.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -75855 for 800 contacts (-94.8/contact) +
2D Compatibility (PS) -11361 + (NN) -3170 + (LL) 4556
1D Compatibility (HY) -4800 + (ID) 1250
Total energy: -91880.0 ( -114.85 by residue)
QMean score : 0.622
(partial model without unconserved sides chains):
PDB file :
Tito_2B78.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2B78-query.scw
PDB file :
Tito_Scwrl_2B78.pdb
: