Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDYAPHTAENVVQNANKLIDVFRKNNGFIAFVRVNFYDGKDVLQPNAMISLPPK--EGDDYSRFHHLLDKR-------DDDFVIDKRHFSAFVGTDLDLQLRRRGIDTIVLGGVATHIGVDTTARDAYQLNYNQFFVTDMMSAQNETLHQFPIDNVFPLMGQTITTNDFLNILN
3O94 Chain:A ((46-209))
------PAQAISDAISKVTRLAFERGDYIFFTI-DAHEENDCFHPE-SKLFPPHNLIGTSGRNLYGDLGIFYQEHGSDSRVFWMDKRHYSAFSGTDLDIRLRERRVSTVILTGVLTDISVLHTAIDAYNLGYDIEIVKPAVASIWPENHQFALGHFKNTLGAKLVDENLNEL--
General information:
TITO was launched using:
RESULT:
Template:
3O94.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72080 for 1122 contacts (-64.2/contact) +
2D Compatibility (PS) -16686 + (NN) -5443 + (LL) 704
1D Compatibility (HY) -8800 + (ID) 2250
Total energy: -104555.0 ( -93.19 by residue)
QMean score : 0.350
(partial model without unconserved sides chains):
PDB file :
Tito_3O94.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3O94-query.scw
PDB file :
Tito_Scwrl_3O94.pdb
: