Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFKDFFNRTKKKKYLTVQDSKNNDVPAGIMTKCPKCKKIMYTKELAENLNVCFNCDHHIALTAYKRIEAISDEGSFTEFDKGMTSANPLDFPSYLEKIEKDQQKTGLKEAVVTGTAQLDGMKFGVAVMDSRFRMGSMGSVIGEKICRIIDYCTENRLPFILFSASGGARMQEGIISLMQMGKTSVSLKRHSDAGLLYISYLTHPTTGGVSASFASVGDINLSEPK--ALIGFAGRRVIEQTINEKLP-DDFQTAEFLL-EHGQLDKVVHRN-DMRQTLSEILKIHQEVTK |
1X0U Chain:A ((32-258)) | ---------------------------------------------------IQFQHSKGKLTARERLALLFDDGKFNEIMTFA-TTRATEFGLD--------KQRFYGDGVVTGWGKVDGRTVFAYAQDFTVLGGSLGETHANKIVRAYELALKVGAPVVGINDSGGARIQEGALSLEGYGAVFKMNV-MASGVIPQITIMAGPAAGGAVYS-PALTDFIIMIKGDAYYMFVTGPEITKVVLGEEVSFQDLGGAVVHATKSGVVHFMVDSEQEAINLTKRLLSYLPSNN- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1X0U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -81622 for 1911 contacts (-42.7/contact) +
2D Compatibility (PS) -23760 + (NN) -4884 + (LL) 4456
1D Compatibility (HY) -6000 + (ID) 2350
Total energy: -114160.0 ( -59.74 by residue)
QMean score : 0.443
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