Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRNDLETLKHIIDSSNRITFFTGAGVSVASGVPDFRSMG-GLFDEISKDGLS-PEYLLSRDYLEDDPEGFINFCHKRLLFVDTKPNIVHDWIAKLERNQQSLGVITQNIDGLHSDAG--SQHVDELHGTLNRFYCNACHKSYT----KSDVIDRTLKHCDNCGGAIRPDIVLYGEMLDQPTIIRALNKIEHADTLVVLGSSLVVQPAAGLISHFKGD-NLIIINKDRTPYDSDATLVIHDDMVSVVKSLMTE |
| 4BVF Chain:A ((21-231)) | -------------ACQRVVVMVGAGISTPSGIPDFRSPGSGLYSNLQQYDLPYPEAIFELPFFFHNPKPFFTLA-KELYPGNYKPNVTHYFLRLLHDKGLLLRLYTQNIDGLERVSGIPASKLVEAHGTFASATCTVCQRPFPGEDIRADVMADRVPRCPVCTGVVKPDIVFFGEPLPQRFLLHVVD-FPMADLLLILGTSLEVEPFASLTEAVRSSVPRLLINRD-------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BVF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -82370 for 1544 contacts (-53.3/contact) +
2D Compatibility (PS) -21585 + (NN) -6406 + (LL) 3124
1D Compatibility (HY) -18000 + (ID) 3450
Total energy: -128687.0 ( -83.35 by residue)
QMean score : 0.384
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