Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MATQDPRTKFKTTEYEKQEQEVPGLQSEMTPAPDCGETSYQGHQRLQGYKMLVTGGDSAIGRAAAIAYAKEGADVAINYLPSEEQDAQEVRQVIEESGQKAVLIPGDIRDEQFNYDLVEQAYQQLGGLDNVTLVAGHQQYHDDIHGFTTEAFTETFETNVYPLFWTVQKALEYLKP--GASITTTSSVQGYNPS-PILHDYAASKAAIISLTKSFSEELGPKGIRVNCVAPGPFWSPLQIS---GGQPQSKIPTFGQKTPLGRAGQPVELCGTYVLLASEESSYTTGQVFGVSGGVQID |
3TOX Chain:D ((4-255)) | -------------------------------------------SRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVT--ARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHA-LKRIARPEEIAEAALYLASDGASFVTGAALLADGGASV- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TOX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -88371 for 2158 contacts (-41.0/contact) +
2D Compatibility (PS) -26386 + (NN) -9299 + (LL) 2084
1D Compatibility (HY) -8000 + (ID) 4200
Total energy: -134172.0 ( -62.17 by residue)
QMean score : 0.490
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