Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKQRTLSIIKPDALKKKVVGKIIDRFESNGLEVVAMKRLHLSVKDAENFYAIHRERPFFKDLIEFMVSGPVVVMVLEGKDAVAKNRELMGATDPKLAQKGTIRADFAESIDANAVHGSDSLENAHNEIAFFFAAREF
3NGU Chain:A ((4-137))
--ERTFIAVKPDGVQRGLVGEIIARFERKGYKLVALKILQPTTEQAQGHYKDLCSKPFFPALVKYFSSGPIVCMVWEGKNVVKSGRVLLGATNPADSQPGTIRGDFAVDVGRNVCHGSDSVESAEREIAFWFKADEI
General information:
TITO was launched using:
RESULT:
Template:
3NGU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55089 for 1028 contacts (-53.6/contact) +
2D Compatibility (PS) -14125 + (NN) -821 + (LL) 272
1D Compatibility (HY) -12400 + (ID) 3100
Total energy: -85263.0 ( -82.94 by residue)
QMean score : 0.518
(partial model without unconserved sides chains):
PDB file :
Tito_3NGU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3NGU-query.scw
PDB file :
Tito_Scwrl_3NGU.pdb
: