Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSNQASHLDNFMNAKNPKSFFDNKGNTKFIAITSGKGGVGKSNISANLAYSLYKK-GYKVGVFDADIGLANLD-VIFGVKTHKNILHALKGEAKLQEIICE-----IEPGLCLIPGDSGEEILKYISGAEALDRFVDEEGVLSSLDYIVIDTGAGIGATTQAFLNASDCVVIVTTPDPSAITDAYACIKINSKNKDELFLIANMVAQPKEGRATYERLFKVAKNNIASLELHYLGAIENSSLL-KRYVRERKILRKIAPNDLFSQSIDQIASLLVSKLETGTLEIPKEGLKSFFKRLLKYLG |
| 3EA0 Chain:A ((3-242)) | -------------------------AKRVFGFVSAKGGDGGSCIAANFAFALSQEPDIHVLAVDISLPFGDLDMYLSGNTHSQDLADISNASDRLDKSLLDTMVQHISPSLDLIPSPATFEKIVNIE-PERVSDLIHI--AASFYDYIIVDFGASIDHVGVWVLEHLDELCIVTTPSLQSLRRAGQLLKLCKEFEKPISRIEIILNRADTNSRI------TSDEIEKVIGRPISKRIPQDEDAMQESLLSGQSVLKVAPKSQLSKTIVDWALHL---------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EA0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -154022 for 1940 contacts (-79.4/contact) +
2D Compatibility (PS) -25316 + (NN) -9466 + (LL) 3044
1D Compatibility (HY) -12400 + (ID) 2600
Total energy: -200760.0 ( -103.48 by residue)
QMean score : 0.497
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