Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRAKMKDIYLDVEKSIKDLQSIFKNADGRDEKLKRFNQEALEVFQKLERESLKELESLKNNEEWENFTIAFYGETGAGKSTLIECLRMFFKEQSK-V--DQQ----ERFKRLYSTYQYNHQNFILLDVPGIEG---SE--KKVIDQISNATQKAHAIFMLPKRLILRKKEKKGKGERLKKSKNSLIRKQRYGRFSTNRLIAQEP |
| 1MV5 Chain:A ((23-166)) | ------------------------------------------------------------FEAQPNSIIAFAGPSGGGKSTIFSLLERFYQPTAGEITIDGQPIDNISLENWRSQIGFVSQDSAIMAGTIRENLTYGLEGDYTDEDLWQVLDLAFARSFVENMPDQLNTEVGERGVKISGGQRQRLAIARAFLRNPKILMLDEA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1MV5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 17625 for 766 contacts (23.0/contact) +
2D Compatibility (PS) -13378 + (NN) 3286 + (LL) 5068
1D Compatibility (HY) -1200 + (ID) 1250
Total energy: 10151.0 ( 13.25 by residue)
QMean score : 0.204
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