Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPNLENLDWKNLGFSYIKTDFRFIATYKNGSWSQGELVSENALQLSEGSPVLHYGQACFEGLKAYRSQKGKALLFRPLENAKRLQTSCERLLMPKVSEELFLKACAEVIKANQKWLAPYKSGASLYLRPFVIGVGDNLGVKPASEYLFIVFCAPVGAYFKGGIEKGGARFITTAFDRAAPKGTGGVKVGGNYAASLLAHKIATEQGYDDCIYLDPTTHTK--IEEVGAANFFGIT-HDD-AFITPHSPSILPSVTRKSLMVLAK-EHLKLKVEEREILIDELGAFKEAGACGTAAIITPIKEIAHNNK-SYSFE-A-PGNITKQLYDLLLSIQQGEQEAPKDWIFEVG |
3UZO Chain:A ((24-358)) | ------IDWSTLGFSYIRTDLRYLAHWKDGEWDAGTLTEDNQIHLAEGSTALHYGQQCFEGLKAYRCADGSINLFRPDQNAARMRMSCRRLLMPELSDEQFIDACLQVVRANEHFLPPYGTGGSLYLRPFVIGVGDNIGVRTAPEFIFSVFCVPVGPYFKGGLTPTNF-ITSD-YDRAAPHGTGAAKVGGNYAASLLPGYEAKKRDFADVIYLDPA--THTTIEEAGAANFFAITQD-GQKFVTPQSPSILPSITKYSLLWLAEHRLGL-EVEEGDIRIDELGKFSEAGACGTAAVITPIGGIQHGDDFHVFYSESEPGPVTRRLYDELVGIQYGDKEAPEGWIVKV- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3UZO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -182501 for 2768 contacts (-65.9/contact) +
2D Compatibility (PS) -35103 + (NN) -10559 + (LL) 456
1D Compatibility (HY) -35200 + (ID) 9350
Total energy: -272257.0 ( -98.36 by residue)
QMean score : 0.502
|
|
|