Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPKRMKCFSQKWLVFFVTHWLLLASLSHAKMAFESNIDTKALEAFGVNASFLSQMPGALKKVNKEEEWKKLVKRFDVNYQFIPIIKNMLIGASVPQEFLF-LAMAESKFSSRAYS---RKKAVGIWQFMPSTAKELGLKVN----HYIDERRDPIKSTQAAIAYLKRLYKQTGE--WYLVAMAYNYGLRKVQNAIKAAGTSDIKVLLDEDKKYLPKETREYIRSILSLALKFNSLDNLKDKEYLLNRGARVSLVGVPFKRHTSLVQVAKNLNLSLETLKSYNHQFRYNILPSKDPTYTIYIPYEKLALFKQRQLKQNKNAQANPKSPFITHVVLPKETLSSIAKRYQVSISSIQLANNLKDSNIFIHQRLIIPTNKKLLATREF |
| 1QSA Chain:A ((451-618)) | ------------------------------------------------------------------------------LAYNDLFKRYTSGKEIPQSYAMAIARQESAWNPKV--KSPVG-ASGLMQIMPGTATHTVKMFSIPGYSSPGQLLDPETNINIGTSYLQYVYQQFG-NNRIFSSAAYNAGPGRVRTWLGNSAGRIDAVAFVESIPF--SETRGYVKNVLAYDAYYRYFMGDKPTLMSATEWGRRY------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QSA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -77432 for 1243 contacts (-62.3/contact) +
2D Compatibility (PS) -17028 + (NN) -5711 + (LL) 16972
1D Compatibility (HY) -4400 + (ID) 1750
Total energy: -89349.0 ( -71.88 by residue)
QMean score : 0.431
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