Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--MRFGLNIDHIVTLREVRKTYEPEILEALFIAKNTHKVDLITIHLREDKRHIQNEDVLRLLEISPLPINIECSINAEITDFLCSLKNKPSKVTIVPENRNEVTTEGGLDC--SLKGLEEVIRAYHNKGIEVSLFVDPLKDALHFAKEHQVKQVEFHTGVYANLHNALYSNANNQIHAISTLKDKCPKELKEELHNAFLQLRRMSKEAFFMGIVVCAGHGLNYSNVKELLKIPSLRELNIGHSVVSKAVLVGLEKAILEMAQLIKR---
1HO1 Chain:A ((2-243))
AELLLGVNIDHIATLRNARGTAYPDPVQAAFIAEQ-AGADGITVHLREDRRHITDRDVRILRQTLDTRMNLEMAVTEEMLAIAVETK--PHFCCLVPE-------EGGLDVAGQRDKMRDACKRLADAGIQVSLFIDADEEQIKAAAEVGAPFIEIHTGCYADAKT------------------------DAEQAQELARIAKAATFAASLGLKVNAGHGLTYHNVKAIAAIPEMHELNIGHAIIGRAVMTGLKDAVAEMKRLMLEARG
General information:
TITO was launched using:
RESULT:
Template:
1HO1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -193105 for 2024 contacts (-95.4/contact) +
2D Compatibility (PS) -25304 + (NN) -18296 + (LL) 1892
1D Compatibility (HY) -13200 + (ID) 4350
Total energy: -252363.0 ( -124.69 by residue)
QMean score : 0.597
(partial model without unconserved sides chains):
PDB file :
Tito_1HO1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HO1-query.scw
PDB file :
Tito_Scwrl_1HO1.pdb
: