Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKEIIQTSSAPKALGPYSQAVKVNGLIFTSGQLGINPATGELVVGATKQAEQAFKNLAAVLEEAGSGLDKIIKATVFFKDLNEFKAVNEVYATFFSS---DFPARSAFQVAKLPLDAEIEIEVIAEA
1QU9 Chain:A ((2-127))
--SKTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNPKTGEVPADVAAQARQSLDNVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATFPARS-VEVARLPKDVKIEIEAIAVR
General information:
TITO was launched using:
RESULT:
Template:
1QU9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30527 for 928 contacts (-32.9/contact) +
2D Compatibility (PS) -13445 + (NN) -7870 + (LL) 496
1D Compatibility (HY) -11200 + (ID) 2950
Total energy: -65496.0 ( -70.58 by residue)
QMean score : 0.556
(partial model without unconserved sides chains):
PDB file :
Tito_1QU9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QU9-query.scw
PDB file :
Tito_Scwrl_1QU9.pdb
: