Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKFSRFILMM---AIACVAAFIFTGNGL-----NAKAAEEIYLIGTDTTFAPFEFEK------DGEHVGIDMDILKAIAKDQNFKYEIKAMGFNAAVQALEANQVDGVIA-GMSITDERKQKFDFSDPYFDSGVVMGILKDNDEIKTYDDLKGKKVAVKTGTEGYAFAEKIKDKYDFDIVVFDDSAQMYDDVKTRNSVACFDDYPVLAYGVQTGNGLKIVTEKEKGN-SYGFAVNKGKNQELLEKFNAGLVNIKASG--EYEKILKNYLGKNA--IKENTTEKGFMGIIKSSWPALLSGLWLTIRLAVVSLIIAFIIGITFGFMKVSNSKILRGIATVYVDIFRGTPLIVQAFFFYFGIPAALDFRMPVFLAGVIALSLNAGAYMV--EIVRGGIQSVDKGQMEAARSLGLPHKKAMMKVVLPQAIRMMIPSFINQFVITLKDTSIMSAIGLVELTQSGKIIMARTFESTWTWLIIGIMYLIVITILTKISDRLERRLRND |
4OPU Chain:A ((2-453)) | MKELKYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIKLYSPDMQTVWTVNHEGFELNAPLYNQRVLKEAQDRGVEIWD----LTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKVVVEATGYSR-SFRSKLPPELPIT----EDLDDKDADVAYREVLLTKED-------IEDHDYLRIFIDQETSPGGYWWYFPKGKN-----KVNVGLGIQGGMGYPSIHEYYKKYLDKYAPDVDKSKLLVKGGALVPTRRP-LYTMAW---NGIIVIGDSGFTVNPVHG----------GGKGSAMISGYCAAKAILSAFETG-------DFSASGLWDMNICYVNEYGAKQASLDIFRRFLQKLSNDDINYGMKKKIIKEEDLLEASEKGDLHLSVADKAMRVISGLGRPSLLFK--LKAVAESMKKIKELYLNYPRSPSSLGSWRREVDNVLTEFNKSLS------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OPU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -233416 for 3679 contacts (-63.4/contact) +
2D Compatibility (PS) -44420 + (NN) -695 + (LL) 4584
1D Compatibility (HY) -9600 + (ID) 4200
Total energy: -287747.0 ( -78.21 by residue)
QMean score : 0.266
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