Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKININVILILLVVLLMVSPFFFNKTGEYGGSDGEAEAEITKIDPSYEPWFEPLYEPKSGEIESLLFTLQGCIGTGIIAYVIGVSRGKRKAENDVNH
2IQG Chain:A ((98-175))
------NVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLV--KQTHVPN-LFSLQLC-------------------------
General information:
TITO was launched using:
RESULT:
Template:
2IQG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7112 for 286 contacts (-24.9/contact) +
2D Compatibility (PS) -6852 + (NN) -1909 + (LL) 2152
1D Compatibility (HY) -3200 + (ID) 1150
Total energy: -18071.0 ( -63.19 by residue)
QMean score : 0.079
(partial model without unconserved sides chains):
PDB file :
Tito_2IQG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IQG-query.scw
PDB file :
Tito_Scwrl_2IQG.pdb
: