Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKENNFISLAKQAREFAYVPYSKFPVGAALVTKDDEVVLGCNIENASFGLTNCAERTAIFKAVSEGKR-DFKQLVVVADT-DGPVSPCGACRQVISEFCAPDMPVILTNLTG-KTATVTVKELLPGAFTSEDML
1R5T Chain:A ((10-141))
-QLEALKRAALKACELSYSPYSHFRVGCSILTNNDVIFTGANVENASYSNCICAERSAMIQVLMAGHRSGWKCMVICGDSEDQCVSPCGVCRQFINEFVVKDFPIVMLNSTGSRSKVMTMGELLPMAFGPSHL-
General information:
TITO was launched using:
RESULT:
Template:
1R5T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -76675 for 1010 contacts (-75.9/contact) +
2D Compatibility (PS) -14388 + (NN) -6311 + (LL) 384
1D Compatibility (HY) -12400 + (ID) 2600
Total energy: -111990.0 ( -110.88 by residue)
QMean score : 0.616
(partial model without unconserved sides chains):
PDB file :
Tito_1R5T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1R5T-query.scw
PDB file :
Tito_Scwrl_1R5T.pdb
: