Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MENRIYLDHAATSPIHPEVIQTMLGAITNTYGNPSSIHYAGREARKALDEARHTIAKSIHATEKEIIFTSGGTEGDNLALIGTALAH-------KENGTHIITSQIEHHAVLKTCEYLET-QGFEVTYLPVDE-HGIVSVESVQAALRPETILVSIMYGNNEIGSIQPIAEIGALLRDQ----------QAIFHTDAVQAYGLLNINVMELGVDLLTTSSHKINGPRGVGFLYVKNGTRLAYQMHGG---EQERKRRAGTENLAGICGFSAASSIMTNERELKNEEYISFKKRMAEIWRSAELDFEVNGL----EADTLPHVFSVRFPGVS--IEQLLMNLDMEGIAVSSGSACTAGTV-DPSHVLVALFGENHPAIQETVRISFGLGNHLEEVEMAATKISEVVTRLMKI |
| 3A9Z Chain:A ((18-430)) | --RKVYMDYNATTPLEPEVIQAVTEAMKEAWGNPSSSYVAGRKAKDIINTARASLAKMIGGKPQDIIFTSGGTESNNLVIHSTVRCFHEQQTLQ--TRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKVNGQVEVEDILAAVRPTTCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKRRVDVEDLGVDFLTIVGHKFYGPR-IGALYVRGVGKLTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAADLVSENCETYEAHMRDIRDYLEERLEA-EFGKRIHLNSRFPGVERLPNTCNFSIQGSQLRGYMVLA--QCQTLLASVGASCHSDHEDRPSPVLLSCG-IPVDVARNAVRLSVGRSTTRAEVDLIVQDLKQAVNQLEG- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3A9Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -180059 for 3364 contacts (-53.5/contact) +
2D Compatibility (PS) -40791 + (NN) -18237 + (LL) 580
1D Compatibility (HY) -21600 + (ID) 6450
Total energy: -266557.0 ( -79.24 by residue)
QMean score : 0.527
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