Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEAMNEQDEMLVMSGKEHREVLKRMLSYTKYHIPSLIWTGVLVLLVTLADVFAPILIKIFLDDYLTPMNLEMQALLILGAGYLGLTIGKSVVWYFQLLFFQKIALEIVQQMRIDIFTKLHSLGMRYFDKTPAGSIVSRVTNDTEAVKDMFINVLSTAIQSLFMLVGIYAAMFALNVQLALYSLLLFPLIVFIIFVYRKYSSQFYRARREKLSQLNAKIAESISGMSIVQQFNQERRLVKEFEKINKDYYDVGMKNIKFNALLLGPAIDLIYALAVVIILSFFGAESLIGPVAIGTIYAFISYFDRFLEAIYNVMERLAMYQEAITAASRVFRIMDETEEVPAQLNDPEAKITRAKIEFKDVSFAYEGGRDV--LKNISFTAEPGQTVALVGHTGSGKSSIINLMMRFYEFERGDILIDGKSIKSHEITELRKKTGLVLQDSFMFYGDINTNIRL-YDKSITDEQIVDAAKFVQADGFIQTLSDEYNHKVIERGASFSSGQRQLISFARTVVTNPQILVLDEATANIDTETESLIQTGLKRMRE--GRTTIAIAHRLSTIKDADLILVLSKGRIIERGTHDSLIAEEGVYHSMYQLQNSGMDLDEAL |
2IXE Chain:D ((17-253)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VKFQDVSFAYPNHPNVQVLQGLTFTLYPGKVTALVGPNGSGKSTVAALLQNLYQPTGGKVLLDGEPLVQYDHHYLHTQVAAVG--PLLFGRSFRENIAYGLTRTPTMEEITAVAMESGAHDFISGFPQGYDTEV-----QLSGGQRQAVALARALIRKPRLLILDNATSALDAGNQLRVQRLLYESPEWASRTVLLITQQLSLAERAHHILFLKEGSVCEQGTHLQLMERGGCYRSM-------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2IXE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -142799 for 1737 contacts (-82.2/contact) +
2D Compatibility (PS) -23887 + (NN) -2290 + (LL) 35600
1D Compatibility (HY) -17600 + (ID) 3900
Total energy: -154876.0 ( -89.16 by residue)
QMean score : 0.536
|
|
|